References

References#

[LitvivnukovaTLopezM+20]

Monika Litviňuková, Carlos Talavera-López, Henrike Maatz, Daniel Reichart, Catherine L Worth, Eric L Lindberg, Masatoshi Kanda, Krzysztof Polanski, Matthias Heinig, Michael Lee, and others. Cells of the adult human heart. Nature, 588(7838):466–472, 2020.

[LGM+22]

Tim Lohoff, Shila Ghazanfar, A Missarova, Noushin Koulena, Nico Pierson, Jonathan A Griffiths, Evan S Bardot, C-HL Eng, Richard CV Tyser, Ricard Argelaguet, and others. Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis. Nature biotechnology, 40(1):74–85, 2022. URL: https://www.nature.com/articles/s41587-021-01006-2.

[LRC+18]

Romain Lopez, Jeffrey Regier, Michael B Cole, Michael I Jordan, and Nir Yosef. Deep generative modeling for single-cell transcriptomics. Nature methods, 15(12):1053–1058, 2018.

[LBC+21]

Malte D Luecken, Daniel Bernard Burkhardt, Robrecht Cannoodt, Christopher Lance, Aditi Agrawal, Hananeh Aliee, Ann T Chen, Louise Deconinck, Angela M Detweiler, Alejandro A Granados, and others. A sandbox for prediction and integration of dna, rna, and proteins in single cells. In Thirty-fifth conference on neural information processing systems datasets and benchmarks track (Round 2). 2021.

[XLM+21]

Chenling Xu, Romain Lopez, Edouard Mehlman, Jeffrey Regier, Michael I Jordan, and Nir Yosef. Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models. Molecular systems biology, 17(1):e9620, 2021.